Protein Info for SO0579 in Shewanella oneidensis MR-1

Annotation: serine/threonine protein kinase, putative (NCBI ptt file)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 602 PF00069: Pkinase" amino acids 44 to 254 (211 residues), 76.3 bits, see alignment E=2.7e-25 PF07714: PK_Tyr_Ser-Thr" amino acids 48 to 191 (144 residues), 36.4 bits, see alignment E=3.8e-13

Best Hits

KEGG orthology group: K08282, non-specific serine/threonine protein kinase [EC: 2.7.11.1] (inferred from 100% identity to son:SO_0579)

Predicted SEED Role

"Protein kinase"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.11.1

Use Curated BLAST to search for 2.7.11.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8EJ89 at UniProt or InterPro

Protein Sequence (602 amino acids)

>SO0579 serine/threonine protein kinase, putative (NCBI ptt file) (Shewanella oneidensis MR-1)
MQTPQLQHFYISEEQSIYLLKANDARKHKAWIRLCKQQLSKLGYREIEFIGKGAYGFVFA
GINQADEAHVFKFSRINLPQHIQDRLEEEAFMLSLLKHPNIPGAIKFERVGKQGILVMER
AKGEDLEQLCRRLGALPPAMVMSIARQLADILYYLRTGKPLVHGDIKPSNLVYDIESQHL
SLIDWGSAVFAQRNEHNKAVEDNVMTLMSSDQQHTNARMGDVYFIGEEQLNGALSSPRFD
EQGVAATLYALASGQASRFGAQVIPPTSIGLPMELARTLEGMLSSDAVQRNLAGDYFLKS
MRHSHRLHLPELPKAELMGDIPVWVQSREKDVETVSYSSRKSFLKEHNAQDPIAKMDDIQ
LEKYYRNFLAGMGDTEKGFIAAVGRLGQYPIVGGLAIHWQETGVFIDSNLAVYDAKQKSA
LIIAVNNMVTLARGIKRIGVFKACFFNARDTLHIERENTNKPFVASADLQLPFEVGDVPT
LEDKSRLHSYFEDGKDPDENLELPSEIMEELARINQIHHTGCIIFEALPNHLKIHSYLKL
LNPRKQAAFRASLDRILHYVGKIQGHGVSGFMKLPYKNTRRFTHIERKPEYFYPKNPKEI
GA