Protein Info for Rru_A3657 in Rhodospirillum rubrum S1H

Annotation: Glycosyl transferase, family 4 (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 337 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 46 to 65 (20 residues), see Phobius details amino acids 72 to 88 (17 residues), see Phobius details amino acids 100 to 121 (22 residues), see Phobius details amino acids 128 to 148 (21 residues), see Phobius details amino acids 154 to 174 (21 residues), see Phobius details amino acids 181 to 198 (18 residues), see Phobius details amino acids 214 to 241 (28 residues), see Phobius details amino acids 280 to 297 (18 residues), see Phobius details amino acids 303 to 323 (21 residues), see Phobius details PF00953: Glycos_transf_4" amino acids 73 to 221 (149 residues), 100.7 bits, see alignment E=4.3e-33

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A3657)

Predicted SEED Role

"Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)" in subsystem Methicillin resistance in Staphylococci or Teichoic and lipoteichoic acids biosynthesis (EC 2.7.8.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.-

Use Curated BLAST to search for 2.7.8.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RN44 at UniProt or InterPro

Protein Sequence (337 amino acids)

>Rru_A3657 Glycosyl transferase, family 4 (NCBI) (Rhodospirillum rubrum S1H)
MVGLALLAVPLSAVATGWLRRVLQARKVLDTPNARSSHSVPTPRGGGLAVLAVALALCAV
GWLAGAPVGWRPWALLAGAIVLAALSFADDLGGLGAGKRFAVQALCVGLGLAALPAGALG
LGGLLPEVLGGPLVFLGWLWFVNLYNFMDGIDGLTGVETLSLGLGTALVAGSAGMAMDQM
MAGPILAGAALGFLWWNWHPARIFLGDVGSVPLGYLLGALLAALAAEGHLAAALLLPGYY
LADATLTLGRRALRGAKVWQAHREHFYQRATQGGWPHDRVSLWVGGLNGVLAGLALWSTF
DGYALPALAAGIVAIALVLGTFARAGRGRTQAREYEA