Protein Info for Rru_A3604 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 transmembrane" amino acids 90 to 120 (31 residues), see Phobius details amino acids 141 to 159 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A3604)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RN97 at UniProt or InterPro

Protein Sequence (203 amino acids)

>Rru_A3604 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MTSPPPERPPENPSEPPRIEPDLPQPPSAAELRARALAKAKHLERDRALHERMRIAHENG
LITFYTNFRHLNRGGSPVFSVTDNMVPLLSLLLISVGLLFVSIFAGLGALIFTSIAYLFL
LRPWIARRLRERTIRKMMESAHNWTVLWQFGGIVITLASNPRIGCAAPGSDWRAIARSFV
AHAQGPGLGVGEHDARPFTDGPR