Protein Info for Rru_A3319 in Rhodospirillum rubrum S1H
Annotation: Xanthine-guanine phosphoribosyltransferase (NCBI)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 57% identical to XGPT_DESAG: Xanthine phosphoribosyltransferase (gpt) from Desulfovibrio alaskensis (strain G20)
KEGG orthology group: K00769, xanthine phosphoribosyltransferase [EC: 2.4.2.22] (inferred from 100% identity to rru:Rru_A3319)Predicted SEED Role
"Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)" in subsystem Purine conversions (EC 2.4.2.22)
MetaCyc Pathways
- superpathway of purine nucleotide salvage (13/14 steps found)
- guanine and guanosine salvage I (2/2 steps found)
- xanthine and xanthosine salvage (2/2 steps found)
- superpathway of guanine and guanosine salvage (2/3 steps found)
- guanine and guanosine salvage II (1/2 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 2.4.2.22
Use Curated BLAST to search for 2.4.2.22
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q2RP32 at UniProt or InterPro
Protein Sequence (185 amino acids)
>Rru_A3319 Xanthine-guanine phosphoribosyltransferase (NCBI) (Rhodospirillum rubrum S1H) METKDYASAVYIPIAWELFHRDTRSLAHKLMAKGPFKGIVAITRGGLIPSSIIARELDIR VIESVGVATYDDRTQSTGVQILKELNRDLVGDGEGWLVVDDLVDSGVTARAVKAMLPKAH MATVYAKPEGQKETDTFVVAVRQDVWLLFPWDADLQPNEPLVRRQRDLEVDDVSIGRPDD MPSQG