Protein Info for Rru_A3029 in Rhodospirillum rubrum S1H

Annotation: Glucosamine-fructose-6-phosphate aminotransferase, isomerising (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01135: glutamine-fructose-6-phosphate transaminase (isomerizing)
  • amino acids 2 to 607 (606 residues), 788.7 bits, E=1.9e-241
• PF13522: GATase_6
  • amino acids 67 to 191 (125 residues), 67.4 bits, E=2e-22
• PF13537: GATase_7
  • amino acids 89 to 193 (105 residues), 51 bits, E=2.1e-17
• PF01380: SIS
  • amino acids 289 to 414 (126 residues), 102.5 bits, E=2.4e-33
  • amino acids 460 to 589 (130 residues), 76.6 bits, E=2.4e-25

Best Hits

Swiss-Prot: 61% identical to GLMS_ZYMMO: Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (glmS) from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)

KEGG orthology group: K00820, glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC: 2.6.1.16] (inferred from 100% identity to rru:Rru_A3029)

Predicted SEED Role

"Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 2.6.1.16)

MetaCyc Pathways

• O-antigen building blocks biosynthesis (E. coli) (10/11 steps found)
• UDP-N-acetyl-D-glucosamine biosynthesis I (5/5 steps found)
• UDP-N-acetyl-D-glucosamine biosynthesis II (4/6 steps found)
• chitin biosynthesis (5/9 steps found)
• UDP-N-acetyl-D-galactosamine biosynthesis III (2/6 steps found)
• CMP-legionaminate biosynthesis I (2/10 steps found)
• superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis (6/24 steps found)
• superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis (12/33 steps found)

KEGG Metabolic Maps

• Aminosugars metabolism
• Glutamate metabolism
• Nucleotide sugars metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.6.1.16

Sequence Analysis Tools

See Q2RPX1 at UniProt or InterPro

Protein Sequence (607 amino acids)

>Rru_A3029 Glucosamine-fructose-6-phosphate aminotransferase, isomerising (NCBI) (Rhodospirillum rubrum S1H)
MCGIIGIIGVKDVVPSLMEGLRRLEYRGYDSTGIATLVDGVIDRRRAQGKLGNLEKRLVE
APLAGIIGIGHTRWATHGVPNEVNAHPHASAKVAVVHNGIIENFVALRDRLLAKGHVFAT
ATDTEAVVHLITEYLDEGLSPEEAVGKAIGELEGAFALVILIAGEENLLFAARKGSPLAV
GYGDGEMFLGSDALTLAPLTRRIAYLEDGDWVRVTREGAVFRDVSGAIVERKIHLSSVSG
AMIGKGGHRHYMLKEIYEQPQVIGDTLNAMFNPVERTITLPPLPFALDDVERVTLIACGT
SSYAAMVARYWIESIARVPVDLDVGSEFRYRDPPLQAGGLALFISQSGETADTLAALRHC
KAKGLRCLSIVNVAESTMARESDAVLTTLAGPEIGVASTKAFTTQLVVLACLTIALARAK
GQLDADGEARLSKGLTEVPARAAEILKYDEDLRAIAQTVAEARDVLYLGRGTAFPIALEG
ALKLKEISYIHAEGYAAGEMKHGPIALIDETVPVIVIAPSDGLFDKTASNVQEVVARGGK
VIFLSDSEGNRRLGVTPAFSVVLPAVDPFVAPILYAIPVQLLAYHVAVIKGTDVDQPRNL
AKSVTVE