Protein Info for Rru_A2791 in Rhodospirillum rubrum S1H
Annotation: DeoxyUTP pyrophosphatase subfamily 1 (NCBI)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 53% identical to DUT_DESPS: Deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) from Desulfotalea psychrophila (strain LSv54 / DSM 12343)
KEGG orthology group: K01520, dUTP pyrophosphatase [EC: 3.6.1.23] (inferred from 100% identity to rru:Rru_A2791)Predicted SEED Role
"Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)" in subsystem Nudix proteins (nucleoside triphosphate hydrolases) (EC 3.6.1.23)
MetaCyc Pathways
- superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (16/18 steps found)
- pyrimidine deoxyribonucleotides de novo biosynthesis III (9/9 steps found)
- pyrimidine deoxyribonucleotides de novo biosynthesis I (8/9 steps found)
- superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) (11/14 steps found)
- pyrimidine deoxyribonucleotides de novo biosynthesis II (4/7 steps found)
- pyrimidine deoxyribonucleotides dephosphorylation (1/3 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.6.1.23
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q2RQK7 at UniProt or InterPro
Protein Sequence (154 amino acids)
>Rru_A2791 DeoxyUTP pyrophosphatase subfamily 1 (NCBI) (Rhodospirillum rubrum S1H) MLQITYLPHYDRATFGPVAYAKPGDAGFDLRAAIAAPITIEPGDITLVPAGIAMAVPEGY EIQVRSRSGLSLKGLIVANAPGTVDSGYRGEFKVILTNIGRVAHTVAPGDRIAQAVLAAV AHMPFVEVAELPPSERGSGGFGSTGVSVAETPRG