Protein Info for Rru_A2738 in Rhodospirillum rubrum S1H

Annotation: Glycosyl transferase, group 1 (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 540 PF00534: Glycos_transf_1" amino acids 147 to 261 (115 residues), 55.6 bits, see alignment E=1.5e-18 PF13692: Glyco_trans_1_4" amino acids 151 to 262 (112 residues), 57.4 bits, see alignment E=6.1e-19 PF13489: Methyltransf_23" amino acids 355 to 512 (158 residues), 54.6 bits, see alignment E=3.3e-18 PF13649: Methyltransf_25" amino acids 379 to 467 (89 residues), 51.1 bits, see alignment E=5.6e-17 PF08241: Methyltransf_11" amino acids 379 to 471 (93 residues), 41 bits, see alignment E=7.6e-14 PF08242: Methyltransf_12" amino acids 379 to 469 (91 residues), 40.6 bits, see alignment E=1.1e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A2738)

Predicted SEED Role

"galactosyltransferase-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQR0 at UniProt or InterPro

Protein Sequence (540 amino acids)

>Rru_A2738 Glycosyl transferase, group 1 (NCBI) (Rhodospirillum rubrum S1H)
MNGSLPRLLIIDTLKPVERSFMRDLIAPLDRDFAVRFLHPQGTEGLAEAIADADVVWFEW
CAHHAAWATRSLDLGGKRVVIRLHSTEIYDSTFPQSIPWEVVDHLILVGEDIRGEVEEAI
PGLAKRVEITVIANGVDCTLFRPGRAADPHAIGWVGDVAMKKNPMLALQIIGALVEEDPR
YHLHMAGAMPCRRTARYLAHQIAERGLGAHVSFHGPVSTMPAWYRAMGALLSTTLYESFG
LNILEAMASGCRPVVHNYPGAGRLWPREILFNSVDEAVALLRREDFADYRAFAETFDLPR
QIEATRALLSGPPGARKNAVFDPAAYWDRRHGDLRGQLRAVAHQDLDEAENRADYEENLR
HLIAPLQARFATPQGVDLLDCGCGSGHVAQRFAGLGFSVRGVDFSPTAVDEAAKRVPGGS
FQCGSLADLSEPPARVVLCLDVLFHVLDDAVWRQTLDRLAAHVVPGGVLLILEHFPEAEG
QGAAAAPGPVRHVRWRSLAAYQERFAALGLTLAGVDVYRQPASGAMKTLMVVDRLPEKEA