Protein Info for Rru_A2736 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 868 PF13524: Glyco_trans_1_2" amino acids 191 to 320 (130 residues), 84.1 bits, see alignment E=1.4e-27 PF08241: Methyltransf_11" amino acids 735 to 778 (44 residues), 23.8 bits, see alignment 8.8e-09 PF13489: Methyltransf_23" amino acids 735 to 821 (87 residues), 49.3 bits, see alignment E=7.1e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A2736)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RQR2 at UniProt or InterPro

Protein Sequence (868 amino acids)

>Rru_A2736 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MTTDQPGFRRAWRRRLREGDAADPPLVIFVVTSTRSDRLAGDWFTALELGRALEKRFCWR
WRCIARDSAPTQLAEADIVVHMLHDVDIRTFRPPKPGALVVGWMRNWFNLWPSVSWIDDF
DLLLASSERARAFVSAATALPCGLLRIATDPERFAQGHPDPALASEVLFTGSYWGTQRGL
AQSARPADWPGRFAIYGKNWEEVAGMGAHGRGPLPYERLPDAYASTTLVLDDANAVTAPW
GSVNSRVFDALAAGRLVLSNGALGAQEIFGDALPCFSGAEELTALVRSYLTDEAARQAKV
ATLRAMVLAGHTYAHRAEEFRAQIAALVGGLRLSIKTDREPGHPDRPESDAALQNDGQIR
ALSRALKTRGHMVRVDALAQWTRAAGRLDDAALIVRGEARFPYDLGIPLLIWACSHPTRV
SPDEAAPALAVFEPGWADQDPSLPGALSVPLLAPVPLPPLPRPATPPSVPSVVYVGSAPR
DPALRAASIVALALEAKLPFGVYGQGWHDIVPPTQLFDGVLSDDMVRLLFGYARVVLIDP
LEDAALRCLPPPRFLDAIQAGAVPVCRAETARNCPGDWLRAMEIAESADELHRLVRRLAT
NPGYHAQRLAVLSDLLDPTPADAFAARIEDSVRRAWTTLADTEPPAPPVCPLCGGIAFGS
GPGGLAPLPPRDQPVRCLSCGALERHRGLRQMWTILAEAGLCAGRALQFSPEASVKPQWF
TTFEVSVFGGDNHLDLQAIDRPNGAYEWVLCNHVIEHVADDGLALAELLRILAPGGVIEL
TVPDPFSQRLTEDWGFPREDLHGHYRLYGRDLLERLFRRTGPLPVFPATARDPLTGREDL
VLFLAREPQALAPLAALLPRSELALTGL