Protein Info for Rru_A2458 in Rhodospirillum rubrum S1H

Annotation: Protein of unknown function DUF482 (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 PF04339: FemAB_like" amino acids 47 to 417 (371 residues), 519.8 bits, see alignment E=4.5e-160 PF13480: Acetyltransf_6" amino acids 228 to 363 (136 residues), 35.1 bits, see alignment E=1.4e-12

Best Hits

KEGG orthology group: K09919, hypothetical protein (inferred from 100% identity to rru:Rru_A2458)

Predicted SEED Role

"FIG110192: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RRI7 at UniProt or InterPro

Protein Sequence (423 amino acids)

>Rru_A2458 Protein of unknown function DUF482 (NCBI) (Rhodospirillum rubrum S1H)
MRLQDGGRGPIYEKPRPPSLPGSGPSMSPSSDPAAPGALSLSVVESLSAVDPAAWDRCAG
HDNPFVSHAFLLALEDSGSASVKTGWLPRHAVLHDDQGRLRACAPLYLKSHSYGEYVFDW
GWAEAYERAGGRYYPKLQCAVPFTPATGPRLLVPADDPEADHLRDTLAAGLIEIARRLKV
SSLHITFPSAAEVPVLEAQGMLVRLGMQYHWQNRGYASFDDFLAALSSRKRKTIRKERER
ANGQGVRIRTLTGAAIEPRHWQAFHGFYLDTVERKWGQAYLSADFFPRLGATMGERVVLV
VGEDETSGEVVCGALNLLGTNTLYGRNWGSLSPYTYLHFEVCYYRAIDFAIEHGLTWVEA
GAQGDHKISRGYLPRPTWSGHWIADTGFRRAVAAFVERERATLEGTMEALEDLGPFRCEG
PAP