Protein Info for Rru_A2037 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1088 signal peptide" amino acids 9 to 11 (3 residues), see Phobius details transmembrane" amino acids 12 to 29 (18 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A2037)

Predicted SEED Role

"Large exoproteins involved in heme utilization or adhesion"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RSQ8 at UniProt or InterPro

Protein Sequence (1088 amino acids)

>Rru_A2037 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MVHSGVRVLFRVLGALGLLTLALLAFFGWRLEQGPLSLSLLTPYIEDALADPEGDFEVVI
DGTELAWGGWQRPLNLRVVGVVVRDADHRLIARLPMVAVTLAPRALLDGEVALRRVEILS
PSLHITRLESGEISLGGEAPLPIVPSIGSPVHSPGDGQNPVGPSAVAGGDASAGERAGRT
PLSERLDRWVAMLTDQAGGVARLTLRDGAIDFDDLRSGVSMHMPRVNATLIADSQGVAGD
IAAHLHLAQSLARIDLSISHRVGEGTVEAEATISGLDARQLAQAVPALAAEGTLDLALSG
SARAVLDLDLLEGPAPLSGVLDAGFALEGRDGALALPEPMGTTYPLPRISLSGGIEDGFS
AVFLDKVDVDLGGPTVHATLRAEDPLTAPRVAITTSVLGLSIEDLKRFWPHDKVDGAREW
IALNLSEGTIRQGDFTFDLAGPSLQDIDITALQGLAMVEGIAVDYRNPLPPLEQMSGEIV
FGLKEIAVKVATGRLRGVEGLEVVKGTVVFGGLDAEDQTAAIAVSTKGPLASVMAVIDHQ
PLNYAKAVGIDPKTAKGAVKADLSFAFPLLKDLTFEQMAIRVEGDVEGVALPKAAFGRDV
SDGKLKVVLDQNGMDISGTATLASVPVALVWRENFVDAPFLSRYKVKGTLDAKGMASLGI
DPALISPPYGGGVAKADLTYIRLPGGRATLEGRLDLTETVLDLEAFGWRKPAGSLGAAKV
SARLGGKDDRLDIDMTAEPQMTAKASVFLNAKGDEIKRVDVDSFVVGNTRLAGSVSLGGS
AGPDIRIGDGVLDLRPYFDRRRGAATSPTPAEGVAAKPTKDLPAFSATVTLRQIMLANDV
VFEHVTARAARDAHHWRQAVVNAAVRGSSPLALALEPKGTQRRFTLSAADAGTILRGFDV
IETVAGGNLSVEALSDPGGVARGRVLVKDFRLQKAPVLAQILSVAGLTGILDVLGGQGIA
FSTLVVPFVYDDPVVTVSEAQAYGNAIGLTAEGAINLDDERLSLKGTVVPAYAINSLLGK
IPLLGSIIVGGKGQGVIGVNYAVSGDVSKPAISVNPLSALTPGFLRGIFKIFDQPDQTAT
EKVGGTGG