Protein Info for Rru_A1651 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 388 transmembrane" amino acids 7 to 27 (21 residues), see Phobius details amino acids 47 to 67 (21 residues), see Phobius details amino acids 74 to 93 (20 residues), see Phobius details amino acids 99 to 120 (22 residues), see Phobius details amino acids 132 to 152 (21 residues), see Phobius details amino acids 160 to 179 (20 residues), see Phobius details amino acids 211 to 231 (21 residues), see Phobius details amino acids 243 to 261 (19 residues), see Phobius details amino acids 273 to 289 (17 residues), see Phobius details amino acids 295 to 316 (22 residues), see Phobius details amino acids 328 to 347 (20 residues), see Phobius details amino acids 359 to 377 (19 residues), see Phobius details PF07690: MFS_1" amino acids 15 to 317 (303 residues), 45 bits, see alignment E=7.3e-16 amino acids 212 to 377 (166 residues), 41.6 bits, see alignment E=8.1e-15 PF06779: MFS_4" amino acids 16 to 375 (360 residues), 284.8 bits, see alignment E=1.3e-88

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A1651)

Predicted SEED Role

"Putative transport protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RTU4 at UniProt or InterPro

Protein Sequence (388 amino acids)

>Rru_A1651 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MERADQTATIAAALVLVIGMGFGRFAFTGLYPLMVADQQISVAGGSYAASANYAGYLLGA
LLAALPLGMPSRKLCTLAVVTTVALLGLLALPLTEGLIVALRGVAGLSSAFAIVAASHWL
IHDQGHHHGAPFLFSGVGIGIFLSAEMIAAGHQGLLSSRAIWLMLAIAALALGGVSIALQ
RRAEGAQTHQEPPSPRAADARPRPSLGATRLIVIYGLAGLGYIITATYLPLLVRTAFAAI
DPAHIWAVFGLGAVPSCFLWHALHDRWGTRRSLLANLGVQAIGVTLPVLHTPASFIFSAI
LVGGTFMGTVTIAMPAARKLAGKVRFNMLAIMTASYGVGQIIGPLMANALYRRTASFDTP
LIIAALALVVAATFCLRRGGTAPPSRRP