Protein Info for Rru_A1547 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 526 TIGR00197: YjeF family N-terminal domain" amino acids 32 to 227 (196 residues), 133.2 bits, see alignment E=9.7e-43 PF03853: YjeF_N" amino acids 50 to 205 (156 residues), 127.4 bits, see alignment E=5.6e-41 TIGR00196: YjeF family C-terminal domain" amino acids 246 to 491 (246 residues), 155.7 bits, see alignment E=1.6e-49 PF01256: Carb_kinase" amino acids 263 to 491 (229 residues), 148.1 bits, see alignment E=3.2e-47

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A1547)

Predicted SEED Role

"NAD(P)HX epimerase / NAD(P)HX dehydratase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RU48 at UniProt or InterPro

Protein Sequence (526 amino acids)

>Rru_A1547 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MPLTQSGPRFWQSALPLPGELGGRARPVLGVAEMAAADQAAAAAGRPGLVLMEAAGAAVV
REIAARWSKRPVRVLCGPGNNGGDGYVIARLLAARGWPVRVMALEGAPPPGGDAAGMAHL
WRGRVDPMTAEDLRPGDLVVDALFGAGLSRPLAGAAAEAVARINALGLTCVGVDVPSGVD
GDSGRILGAAPFCALTVTFFHPKPGHLLVPARERIGELVIADIGLPETVLDAAPPRAFVN
GPGLWTLPRPAVEGHKFARGHAVVIGGARMTGAARLAARACRRVGAGLLTIACAEEARLI
YALDQPGAMVWGIGGEGPIARLLDDPRRNAFLLGPGYGRGAETAALALMLAKGGRALVLD
ADALTSLSGKLEEFSRTLCYDCVLTPHEGEFRALFAAALGAEAAPERGRLARARAAARAS
GAVVVLKGPDTVIAAADGRAAISVGAPADLATAGSGDVLAGLVLGLLAQGLPGFEAAAAA
VWLHGAAGRAAGPGLIAEDLPEALPALLAALRSAPSPNRRPTDRTV