Protein Info for Rru_A1490 in Rhodospirillum rubrum S1H

Annotation: Protein-tyrosine kinase (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 734 transmembrane" amino acids 27 to 45 (19 residues), see Phobius details amino acids 451 to 472 (22 residues), see Phobius details PF02706: Wzz" amino acids 17 to 104 (88 residues), 36 bits, see alignment E=1.5e-12 PF13807: GNVR" amino acids 400 to 471 (72 residues), 34.2 bits, see alignment E=3.8e-12 TIGR01007: capsular exopolysaccharide family" amino acids 520 to 722 (203 residues), 118.1 bits, see alignment E=1.9e-38 PF01656: CbiA" amino acids 549 to 713 (165 residues), 26.9 bits, see alignment E=8.2e-10 PF13614: AAA_31" amino acids 550 to 676 (127 residues), 30.1 bits, see alignment E=9.4e-11

Best Hits

KEGG orthology group: K00903, protein-tyrosine kinase [EC: 2.7.10.-] (inferred from 100% identity to rru:Rru_A1490)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Isozymes

Compare fitness of predicted isozymes for: 2.7.10.-

Use Curated BLAST to search for 2.7.10.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RUA4 at UniProt or InterPro

Protein Sequence (734 amino acids)

>Rru_A1490 Protein-tyrosine kinase (NCBI) (Rhodospirillum rubrum S1H)
MAPDQAKPAPFRDQFHRVLGVIRRGKLLILACVLLVVAPTIVFLQQATPRYTANAAVLIE
APDATDSLLDRSDMSRTRLNDLMITTEAEVLGSTPLARRVIDKLGLDQDPEFNARLRKPT
AFQRVTFWLNPINWIPDGWRAGRKDEATMTPKVREELQRARVTATFLGRLSVKPKRRSFV
IDLEFTATSREKSALIVNTLADLYVFDRLEAGFDETKRVNEWLAQRLESLRGDVALAEAA
VETYRAENGLRPVGERQGTVANQQLTELNSRLVLARADLAQKQARLDQVRSLSRGGGVAT
ASDVLQSSLIQQLRQREAEVRSALSEAEKTYGERHPKIIGMRADLGQLQSSIGGEIGKIA
SSAEGDVEIAAIGVRTLEREIVGLRQEGDVQGGAIVRLRELERQADSSRSLYEAFLSRFK
RNAEQEQIQRANARLLSPADIPASPSYPRKIPILLVMMVVGFGLGIGLVFLVEGLDGTVH
STEELEALVGLPPLAVIPVVRGRGGGAVVLARPRAPIAHAFRNLRTALTLNGEETRRRIV
MVSSSVPKEGKSFVSLGLALTYARAGERVLLIDADVHRSSLAATIGIDGTRGLAQVLRGE
ATLDQVVTRPPGMDLDFLAAGEASAQEELFDASTLGALLSEPASRYDRIIIDTAPVLAVA
DARIVAGVADQVIYLVRWGSTQQTAVRNGIKLLRDVRAPLAGMVLSQVDVRRHAVYGYGD
YGASYGRYQEYYAE