Protein Info for Rru_A1481 in Rhodospirillum rubrum S1H

Annotation: hypothetical protein (NCBI)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 460 transmembrane" amino acids 23 to 49 (27 residues), see Phobius details amino acids 54 to 76 (23 residues), see Phobius details amino acids 95 to 115 (21 residues), see Phobius details amino acids 121 to 143 (23 residues), see Phobius details amino acids 155 to 173 (19 residues), see Phobius details amino acids 179 to 201 (23 residues), see Phobius details amino acids 213 to 232 (20 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 295 to 317 (23 residues), see Phobius details amino acids 324 to 345 (22 residues), see Phobius details amino acids 357 to 374 (18 residues), see Phobius details amino acids 380 to 400 (21 residues), see Phobius details amino acids 408 to 425 (18 residues), see Phobius details amino acids 430 to 447 (18 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rru:Rru_A1481)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q2RUB3 at UniProt or InterPro

Protein Sequence (460 amino acids)

>Rru_A1481 hypothetical protein (NCBI) (Rhodospirillum rubrum S1H)
MTLIPPLRRSGLAGRALHPAGPIAVQIFGQGVNFLSQTALLAVFGAAFYGPVGLALVAAA
TLCFLGELGYPVVLLSAVARDDDWPRHWRIALFQRVMVLGGGTPCALGLWAWIYGIESEG
WGALAAAAPGIIASAWQPAPLLYGQGRAQAAALSVYGRWGVFGLGMTLVLILGVPSDWAV
GLVFSAGMIAPLLFWPWLGLDAVLLRPLVSRRLGRLGSGALGWWVMSLVGTLNDRGLPFV
IEATRPAILAHALLALQVLQGLTALAGQFDRLLVPWLIGRLKAPGWARDLAKVQGGVLSI
ALGVAALLVAILALAAPMAERGALSWFLAEWALVLCGGAFTAAILAKGRERPFARRLTML
VIIGVIAQAGVVLADGPFAAVMIVRLVVAGLCVVVALRLLGLSAPREAWFLAAGGAACVA
LANATPAAAPLIGLGLGLAGLGLWRGWKACRHIDRGESKG