Protein Info for DORF10286 in Desulfovibrio vulgaris Hildenborough JW710

Annotation: no description

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 141 transmembrane" amino acids 13 to 37 (25 residues), see Phobius details PF07963: N_methyl" amino acids 8 to 33 (26 residues), 35.8 bits, see alignment 2e-13 TIGR02532: prepilin-type N-terminal cleavage/methylation domain" amino acids 11 to 34 (24 residues), 34.3 bits, see alignment 6.7e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (141 amino acids)

>DORF10286 no description (Desulfovibrio vulgaris Hildenborough JW710)
MKRLHEQRKGQKGFTLIEIIAVLVILGILAAVAVPRYFQLQTNAAQRAADATAAELQARI
NQLFARELITANGVCATALAGMDTREAALWEGAAGTLSGWTTNPTAFNFATDAGDTIDVA
FTNADVSATPLTAQVTLPSCP