Gene info for SO_1280 in Shewanella oneidensis MR-1

Annotation: no description
Type 99: Unclassified feature (possibly a pseudogene)
Located on scaffold 139, - strand, nucleotides 1,331,926 to 1,332,642
See nucleotide sequence around SO_1280 or for all of scaffold 139

Other databases: MicrobesOnline

Nearby Genes

500 ntgabD and gabT are separated by 63 nucleotidesgabT and SO1277 are separated by 85 nucleotidesSO1277 and SO1278 are separated by 469 nucleotidesSO1278 and SO1279 are separated by 64 nucleotidesSO1279 and SO_1280 are separated by 571 nucleotidesSO_1280 and SO1279.2 are separated by 17 nucleotidesSO1279.2 and SO1281 are separated by 166 nucleotidesSO1281 and SO1282 are separated by 42 nucleotidesSO1282 and tRNA-Met-5 are separated by 273 nucleotidestRNA-Met-5 and rpoD are separated by 259 nucleotides SO1275: gabD - succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data), at 1,324,098 to 1,325,546 gabD SO1276: gabT - 4-aminobutyrate aminotransferase (NCBI ptt file), at 1,325,610 to 1,326,887 gabT SO1277: SO1277 - proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file), at 1,326,973 to 1,328,523 SO1277 SO1278: SO1278 - methyl-accepting chemotaxis protein (NCBI ptt file), at 1,328,993 to 1,331,113 SO1278 SO1279: SO1279 - hypothetical protein (NCBI ptt file), at 1,331,178 to 1,331,354 SO1279 SO_1280: SO_1280 - no description, at 1,331,926 to 1,332,642 _1280 SO1279.2: SO1279.2 - hypothetical transposase (NCBI ptt file), at 1,332,660 to 1,333,124 SO1279.2 SO1281: SO1281 - hypothetical protein (NCBI ptt file), at 1,333,291 to 1,333,962 SO1281 SO1282: SO1282 - ISSod11, transposase (NCBI ptt file), at 1,334,005 to 1,334,961 SO1282 SO_t023: tRNA-Met-5 - tRNA-Met (RefSeq), at 1,335,235 to 1,335,311 tRNA-Met-5 SO1284: rpoD - RNA polymerase sigma-70 factor (NCBI ptt file), at 1,335,571 to 1,337,421 rpoD
Locus Name Description Strand Phenotype
SO1275 gabD succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) + strong
SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) + sig.
SO1277 SO1277 proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) - strong
SO1278 SO1278 methyl-accepting chemotaxis protein (NCBI ptt file) + insig.
SO1279 SO1279 hypothetical protein (NCBI ptt file) + insig.
SO_1280 SO_1280 no description - no data
SO1279.2 SO1279.2 hypothetical transposase (NCBI ptt file) - no data
SO1281 SO1281 hypothetical protein (NCBI ptt file) - insig.
SO1282 SO1282 ISSod11, transposase (NCBI ptt file) - no data
SO_t023 tRNA-Met-5 tRNA-Met (RefSeq) - no data
SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) - no data

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