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  • Negative cofitness for SMa0929 from Sinorhizobium meliloti 1021

    conjugal transfer protein TraG
    SEED: Type IV secretion system protein VirD4
    KEGG: type IV secretion system protein VirD4

    Computing cofitness values with 243 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SMc01525 dipeptide binding periplasmic protein -0.39
    2 SMa0267 GntR family transcriptional regulator -0.38
    3 SMc02154 hypothetical protein -0.38
    4 SMc02287 DNA-invertase -0.38
    5 SMa1147 hypothetical protein -0.38
    6 SM_b20810 membrane-located cell surface saccharide acetylase -0.37
    7 SM_b20231 sugar ABC transporter substrate-binding protein -0.37
    8 SMc00114 protease II oligopeptidase B hydrolase serine protease -0.35
    9 SM_b20809 arabinose-5-phosphate isomerase -0.35
    10 SMc00094 betaine aldehyde dehydrogenase -0.34
    11 SM_b20908 hypothetical protein -0.34
    12 SM_b20868 two-component sensor histidine kinase -0.34
    13 SMc01526 peptide ABC transporter permease -0.34
    14 SMc01273 S-formylglutathione hydrolase -0.33
    15 SM_b21021 transcriptional regulator -0.33
    16 SMa1087 cation transport P-type ATPase -0.33
    17 SM_b20814 hypothetical protein -0.32
    18 SMc01275 ribosomal large subunit pseudouridine synthase C protein -0.32
    19 SMc02516 ABC transporter permease -0.32
    20 SMc04401 transcriptional regulator -0.32

    Or look for positive cofitness