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  • Negative cofitness for SMa0163 from Sinorhizobium meliloti 1021

    PilQ2 pilus assembly protein
    SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
    KEGG: pilus assembly protein CpaC

    Computing cofitness values with 243 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SMa2327 sensor protein -0.37
    2 SMc02850 DNA polymerase I -0.36
    3 SM_b20113 dehydrogenase -0.35
    4 SMc03866 ABC transporter ATP-binding protein -0.35
    5 SM_b20889 hypothetical protein -0.34
    6 SM_b20119 hypothetical protein -0.34
    7 SMc01645 ABC transporter ATP-binding protein -0.33
    8 SM_b20445 alcohol dehydrogenase -0.32
    9 SMc00072 peroxiredoxin protein -0.32
    10 SMc04881 virulence associated protein -0.31
    11 SMc01810 hypothetical protein -0.31
    12 SMc01659 ferrichrome/ferrioxamine B periplasmic transporter -0.31
    13 SMc02070 hypothetical protein -0.31
    14 SMc02606 sarcosine oxidase subunit alpha -0.30
    15 SMa0934 TraA1 conjugal transfer protein -0.29
    16 SMc00297 sugar fermentation stimulation protein A -0.29
    17 SMa1851 dehalogenase -0.29
    18 SMc01039 hypothetical protein -0.29
    19 SMc03942 hypothetical protein -0.29
    20 SM_b21339 N-terminal part of the catalytic subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase -0.28

    Or look for positive cofitness