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  • Negative cofitness for SM_b21044 from Sinorhizobium meliloti 1021

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

    Computing cofitness values with 243 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SMc01606 permease -0.46
    2 SMc01607 permease -0.43
    3 SMc01204 transmembrane oxidoreductase -0.43
    4 SMc01666 methionine gamma-lyase -0.37
    5 SM_b20880 ATP-dependent RNA helicase -0.37
    6 SMc00691 site-specific tyrosine recombinase XerD -0.36
    7 SMc03838 hypothetical protein -0.36
    8 SMc00228 ATP-dependent DNA helicase RecG -0.35
    9 SMc01575 hypothetical protein -0.35
    10 SMc03127 ABC transporter permease -0.35
    11 SM_b21494 ornithine cyclodeaminase -0.35
    12 SMc01242 signal peptide protein -0.34
    13 SMc01718 hypothetical protein -0.34
    14 SMc01235 excinuclease ABC subunit A -0.34
    15 SMc01643 ABC transporter permease -0.34
    16 SMc03124 periplasmic binding ABC transporter protein -0.34
    17 SMc02738 glycine betaine transport system permease ABC transporter protein -0.33
    18 SMc02077 exodeoxyribonuclease III protein -0.33
    19 SMa0114 two-component response regulator -0.33
    20 SMc01608 ABC transporter ATP-binding protein -0.32

    Or look for positive cofitness