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  • Negative cofitness for Rv3406 from Mycobacterium tuberculosis H37Rv

    Probable dioxygenase
    SEED: Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)
    KEGG: taurine dioxygenase

    Computing cofitness values with 236 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rv2635 Hypothetical protein -0.26
    2 Rv1243c PE-PGRS family protein PE_PGRS23 -0.26
    3 Rv2322c Probable ornithine aminotransferase (N-terminus part) RocD1 (ornithine--oxo-acid aminotransferase) -0.26
    4 Rv1448c Probable transaldolase Tal -0.25
    5 Rv3157 Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M) -0.25
    6 Rv1637c Conserved protein -0.24
    7 Rv0980c PE-PGRS family protein PE_PGRS18 -0.24
    8 Rv2161c Conserved protein -0.23
    9 Rv3345c PE-PGRS family protein PE_PGRS50 -0.23
    10 Rv0280 PPE family protein PPE3 -0.23
    11 Rv2143 Conserved hypothetical protein -0.23
    12 Rv2859c Possible amidotransferase -0.23
    13 Rv2261c Conserved hypothetical protein -0.23
    14 Rv2951c Possible oxidoreductase -0.22
    15 Rv0278c PE-PGRS family protein PE_PGRS3 -0.22
    16 Rv1130 Possible methylcitrate dehydratase PrpD -0.22
    17 Rv0519c Possible conserved membrane protein -0.22
    18 Rv0533c 3-oxoacyl-[acyl-carrier-protein] synthase III FabH (beta-ketoacyl-ACP synthase III) (KAS III) -0.21
    19 Rv1730c Possible penicillin-binding protein -0.21
    20 Rv2657c Probable PhiRv2 prophage protein -0.21

    Or look for positive cofitness