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  • Negative cofitness for RR42_RS05695 from Cupriavidus basilensis FW507-4G11

    pyridoxal-5'-phosphate-dependent protein subunit beta
    SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Computing cofitness values with 143 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 RR42_RS03395 membrane protein -0.43
    2 RR42_RS02585 amino acid ABC transporter permease -0.41
    3 RR42_RS02575 ABC transporter -0.40
    4 RR42_RS02580 amino acid ABC transporter permease -0.39
    5 RR42_RS12190 universal stress protein UspA -0.39
    6 RR42_RS33515 hypothetical protein -0.38
    7 RR42_RS26535 diguanylate cyclase -0.38
    8 RR42_RS30930 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.37
    9 RR42_RS02590 amino acid ABC transporter ATP-binding protein -0.36
    10 RR42_RS02560 cysteine dioxygenase -0.36
    11 RR42_RS19900 MerR family transcriptional regulator -0.36
    12 RR42_RS00070 hypothetical protein -0.34
    13 RR42_RS14135 SAM-dependent methyltransferase -0.34
    14 RR42_RS18000 cell division protein ZapD -0.34
    15 RR42_RS29345 ArsR family transcriptional regulator -0.33
    16 RR42_RS01905 cytochrome C oxidase subunit II -0.33
    17 RR42_RS03380 glucose-6-phosphate isomerase -0.33
    18 RR42_RS03385 sugar kinase -0.32
    19 RR42_RS04980 hypothetical protein -0.32
    20 RR42_RS12210 gamma-glutamyl cyclotransferase -0.31

    Or look for positive cofitness