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  • Negative cofitness for Psyr_4490 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, DeoR family
    SEED: Deoxyribose operon repressor, DeoR family
    KEGG: DeoR family transcriptional regulator, deoxyribose operon repressor

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_1107 Sigma-70 region 2 -0.47
    2 Psyr_1559 luciferase -0.40
    3 Psyr_0432 conserved hypothetical protein -0.38
    4 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II -0.37
    5 Psyr_2469 Propionyl-CoA carboxylase -0.36
    6 Psyr_0499 Urea amidolyase-related protein -0.35
    7 Psyr_2394 succinate semialdehyde dehydrogenase -0.34
    8 Psyr_4175 Transport-associated protein -0.34
    9 Psyr_3280 methylthioadenosine phosphorylase -0.34
    10 Psyr_4236 extracellular solute-binding protein, family 5 -0.34
    11 Psyr_4871 hypothetical protein -0.34
    12 Psyr_1893 Isochorismatase hydrolase -0.34
    13 Psyr_0544 hydroxymethylpyrimidine synthase -0.34
    14 Psyr_0786 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt -0.33
    15 Psyr_1955 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix -0.33
    16 Psyr_2296 Aldo/keto reductase -0.33
    17 Psyr_3599 Alkanesulfonate monooxygenase -0.33
    18 Psyr_4092 Glutathione S-transferase, N-terminal -0.33
    19 Psyr_1450 Plasmid conserved hypothetical protein, RAQPRD -0.32
    20 Psyr_4849 SdiA-regulated -0.32

    Or look for positive cofitness