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  • Negative cofitness for Psyr_4325 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_1190 type III transcriptional regulator HrpR -0.31
    2 Psyr_1215 Type III secretion protein HrcV -0.29
    3 Psyr_3272 5-deoxyglucuronate isomerase -0.28
    4 Psyr_2828 C-5 cytosine-specific DNA methylase -0.28
    5 Psyr_2794 Protein of unknown function DUF264 -0.27
    6 Psyr_2775 hypothetical protein -0.27
    7 Psyr_2773 hypothetical protein -0.27
    8 Psyr_1208 type III secretion protein HrcR -0.26
    9 Psyr_3161 Type I secretion system ATPase, PrtD -0.26
    10 Psyr_3491 Major facilitator superfamily -0.26
    11 Psyr_1191 type III transcriptional regulator HrpS -0.25
    12 Psyr_1195 type III secretion apparatus lipoprotein, YscJ/HrcJ family -0.25
    13 Psyr_2734 benzaldehyde dehydrogenase (NAD+) -0.25
    14 Psyr_1206 type III secretion protein HrcT -0.24
    15 Psyr_2817 hypothetical protein -0.24
    16 Psyr_2807 NinB -0.24
    17 Psyr_1213 type III secretion cytoplasmic ATPase HrcN -0.24
    18 Psyr_2783 conserved hypothetical protein -0.24
    19 Psyr_1210 type III secretion protein HrcQa -0.24
    20 Psyr_2772 Fibronectin, type III -0.23

    Or look for positive cofitness