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  • Negative cofitness for Psyr_4300 from Pseudomonas syringae pv. syringae B728a

    DNA polymerase III, epsilon subunit
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: DNA polymerase III subunit epsilon

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0492 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt -0.40
    2 Psyr_3593 K+ transporter Trk -0.38
    3 Psyr_3921 membrane protein, putative -0.38
    4 Psyr_0493 CheW-like protein -0.37
    5 Psyr_5086 membrane protein, putative -0.37
    6 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K -0.36
    7 Psyr_0343 hypothetical protein -0.36
    8 Psyr_2400 Binding-protein-dependent transport systems inner membrane component -0.36
    9 Psyr_1389 Protein of unknown function DUF1456 -0.36
    10 Psyr_2661 conserved hypothetical protein -0.35
    11 Psyr_3101 Alpha/beta hydrolase fold protein -0.35
    12 Psyr_1045 RND efflux system, outer membrane lipoprotein, NodT -0.34
    13 Psyr_0645 3-ketoacyl-CoA thiolase -0.34
    14 Psyr_3888 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase -0.34
    15 Psyr_4515 hypothetical protein -0.34
    16 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family -0.34
    17 Psyr_3702 Arsenate reductase -0.34
    18 Psyr_4272 Protein of unknown function DUF466 -0.34
    19 Psyr_1106 FecR protein -0.33
    20 Psyr_0443 Triphosphoribosyl-dephospho-CoA synthase -0.33

    Or look for positive cofitness