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  • Negative cofitness for Psyr_4028 from Pseudomonas syringae pv. syringae B728a

    lipoprotein, putative
    SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0336 Outer membrane autotransporter barrel -0.38
    2 Psyr_3152 hypothetical protein -0.33
    3 Psyr_3230 Glycosyl transferase, group 1 -0.33
    4 Psyr_0896 Aldose 1-epimerase -0.33
    5 Psyr_0371 conserved hypothetical protein -0.33
    6 Psyr_2662 hypothetical protein -0.32
    7 Psyr_1321 conserved hypothetical protein -0.32
    8 Psyr_1323 Extensin-like, C-terminal -0.32
    9 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase -0.32
    10 Psyr_0477 Protein of unknown function UPF0001 -0.31
    11 Psyr_1301 Protein of unknown function DUF533 -0.31
    12 Psyr_3748 GCN5-related N-acetyltransferase -0.31
    13 Psyr_4926 GCN5-related N-acetyltransferase -0.30
    14 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module -0.30
    15 Psyr_4450 transcriptional regulator, TetR family -0.30
    16 Psyr_2863 Feruloyl esterase -0.29
    17 Psyr_1916 Peptidase S24, S26A and S26B -0.29
    18 Psyr_2679 Binding-protein-dependent transport systems inner membrane component -0.29
    19 Psyr_2728 vanillin synthase / trans-feruloyl-CoA hydratase -0.29
    20 Psyr_1875 Enoyl-CoA hydratase/isomerase -0.29

    Or look for positive cofitness