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  • Negative cofitness for Psyr_3995 from Pseudomonas syringae pv. syringae B728a

    Helix-turn-helix, Fis-type
    SEED: Nitrogen regulation protein NR(I)
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0188 Protein of unknown function UPF0047 -0.37
    2 Psyr_4870 hypothetical protein -0.36
    3 Psyr_0574 protease FtsH subunit HflK -0.36
    4 Psyr_2095 Conserved TM helix -0.34
    5 Psyr_3336 transcriptional regulator, LacI family -0.34
    6 Psyr_2288 outer membrane transport energization protein ExbB -0.34
    7 Psyr_0475 Protein of unknown function YGGT -0.34
    8 Psyr_1613 septum site-determining protein MinC -0.33
    9 Psyr_1703 Fatty acid desaturase -0.33
    10 Psyr_4562 conserved domain protein -0.33
    11 Psyr_0849 CDP-diacylglycerol--serine O-phosphatidyltransferase -0.33
    12 Psyr_2039 Fimbrial protein -0.33
    13 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) -0.32
    14 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase -0.32
    15 Psyr_1556 hypothetical protein -0.32
    16 Psyr_2632 virulence protein SrfB -0.32
    17 Psyr_0738 type III effector protein AvrRpm1 -0.32
    18 Psyr_1934 conserved hypothetical protein -0.32
    19 Psyr_0122 NAD(P)H dehydrogenase (quinone) -0.32
    20 Psyr_1667 Colicin V production protein -0.32

    Or look for positive cofitness