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  • Negative cofitness for Psyr_3981 from Pseudomonas syringae pv. syringae B728a

    ribosomal small subunit pseudouridine synthase A
    SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal small subunit pseudouridine synthase A

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2940 PAS -0.36
    2 Psyr_3656 ABC transporter, transmembrane region:ABC transporter -0.34
    3 Psyr_2884 xylose-binding protein -0.33
    4 Psyr_1366 transcriptional regulator, LysR family -0.32
    5 Psyr_4397 conserved hypothetical protein -0.32
    6 Psyr_3088 Glycosyl transferase, group 1 -0.31
    7 Psyr_4872 conserved hypothetical protein -0.31
    8 Psyr_1520 SNF2-related:Helicase, C-terminal -0.30
    9 Psyr_2474 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region -0.30
    10 Psyr_3746 hypothetical protein -0.30
    11 Psyr_0590 Transglutaminase-like protein -0.29
    12 Psyr_2650 hypothetical protein -0.28
    13 Psyr_4659 type III effector HopAB1 -0.28
    14 Psyr_2595 Dimethylmenaquinone methyltransferase -0.28
    15 Psyr_2516 ABC transporter, substrate-binding protein, aliphatic sulfonate -0.28
    16 Psyr_3523 Peptidase M20D, amidohydrolase -0.27
    17 Psyr_3971 lipoprotein, putative -0.27
    18 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) -0.26
    19 Psyr_3538 transcriptional regulator, TetR family -0.26
    20 Psyr_0345 Secretion protein HlyD -0.26

    Or look for positive cofitness