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  • Negative cofitness for Psyr_3839 from Pseudomonas syringae pv. syringae B728a

    type III helper protein HopAK1
    SEED: Pectate lyase precursor (EC 4.2.2.2)

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_3078 Peptidase M20:Peptidase M20 -0.49
    2 Psyr_4585 hypothetical protein -0.47
    3 Psyr_1781 Beta-glucosidase -0.46
    4 Psyr_1572 HNH endonuclease -0.40
    5 Psyr_4202 Sodium:neurotransmitter symporter -0.38
    6 Psyr_5010 conserved hypothetical protein -0.38
    7 Psyr_4830 Binding-protein-dependent transport systems inner membrane component -0.38
    8 Psyr_4805 YD repeat protein -0.37
    9 Psyr_0749 AMP-dependent synthetase and ligase -0.37
    10 Psyr_4221 diguanylate cyclase/phosphodiesterase -0.35
    11 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein -0.35
    12 Psyr_4510 hypothetical protein -0.35
    13 Psyr_3613 Glutathione peroxidase -0.35
    14 Psyr_3345 TonB-dependent siderophore receptor -0.35
    15 Psyr_3891 hypothetical protein -0.34
    16 Psyr_4310 hypothetical protein -0.34
    17 Psyr_0087 Fatty acid desaturase -0.34
    18 Psyr_0123 Short-chain dehydrogenase/reductase SDR -0.34
    19 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family -0.33
    20 Psyr_3849 L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein -0.33

    Or look for positive cofitness