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  • Negative cofitness for Psyr_3778 from Pseudomonas syringae pv. syringae B728a

    Substrate-binding region of ABC-type glycine betaine transport system
    SEED: Histidine transporter, periplasmic histidine-binding protein
    KEGG: glycine betaine/proline transport system substrate-binding protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2767 Glycoside hydrolase, family 19 -0.42
    2 Psyr_5081 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase -0.42
    3 Psyr_2940 PAS -0.41
    4 Psyr_1942 conserved hypothetical protein -0.39
    5 Psyr_1800 transcriptional regulator, LysR family -0.39
    6 Psyr_2361 DNA damage-inducible DNA polymerase II -0.39
    7 Psyr_0290 ThiJ/PfpI -0.39
    8 Psyr_2905 ABC transporter -0.37
    9 Psyr_0692 Binding-protein-dependent transport systems inner membrane component -0.37
    10 Psyr_0519 Glutamate-ammonia-ligase adenylyltransferase -0.36
    11 Psyr_4455 conserved hypothetical protein -0.36
    12 Psyr_1179 Oligopeptide transporter OPT superfamily -0.35
    13 Psyr_0855 conserved hypothetical protein -0.35
    14 Psyr_0880 MltA:3D -0.35
    15 Psyr_3384 lipoprotein, putative -0.35
    16 Psyr_0088 PAS:GGDEF -0.35
    17 Psyr_1892 Short-chain dehydrogenase/reductase SDR -0.35
    18 Psyr_2903 Binding-protein-dependent transport systems inner membrane component -0.35
    19 Psyr_4620 conserved hypothetical protein -0.35
    20 Psyr_1937 UspA -0.34

    Or look for positive cofitness