• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for Psyr_3708 from Pseudomonas syringae pv. syringae B728a

    ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal
    SEED: Sensor protein PhoQ (EC 2.7.13.3)
    KEGG: two-component system, OmpR family, sensor histidine kinase PhoQ

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0749 AMP-dependent synthetase and ligase -0.52
    2 Psyr_1929 hypothetical protein -0.50
    3 Psyr_2607 regulatory protein, LuxR -0.45
    4 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) -0.44
    5 Psyr_4493 PAS:GGDEF -0.44
    6 Psyr_2602 transcriptional regulator, LuxR family -0.43
    7 Psyr_4315 Asparagine synthase, glutamine-hydrolyzing -0.43
    8 Psyr_3665 conserved hypothetical protein -0.41
    9 Psyr_0750 conserved hypothetical protein -0.41
    10 Psyr_2914 ATP-dependent DNA helicase RecQ -0.41
    11 Psyr_1768 conserved hypothetical protein -0.40
    12 Psyr_5099 conserved hypothetical protein -0.39
    13 Psyr_0263 Two-component response regulator AlgB -0.39
    14 Psyr_2943 amino acid ABC transporter membrane protein 2, PAAT family -0.39
    15 Psyr_4683 dethiobiotin synthase -0.39
    16 Psyr_3557 L-threonine aldolase -0.39
    17 Psyr_3330 4-hydroxyphenylpyruvate dioxygenase -0.39
    18 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) -0.38
    19 Psyr_4033 YD repeat protein -0.38
    20 Psyr_3627 OsmC-like protein -0.38

    Or look for positive cofitness