• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for Psyr_3479 from Pseudomonas syringae pv. syringae B728a

    Flagellar hook capping protein
    SEED: Flagellar basal-body rod modification protein FlgD
    KEGG: flagellar basal-body rod modification protein FlgD

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated -0.36
    2 Psyr_0437 acyl carrier protein, putative -0.31
    3 Psyr_1315 lipoprotein, putative -0.31
    4 Psyr_0637 LrgB-like protein -0.30
    5 Psyr_3078 Peptidase M20:Peptidase M20 -0.30
    6 Psyr_4312 Erythronolide synthase -0.29
    7 Psyr_0149 succinate semialdehyde dehydrogenase -0.28
    8 Psyr_1135 conserved hypothetical protein -0.28
    9 Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) -0.28
    10 Psyr_3557 L-threonine aldolase -0.28
    11 Psyr_4307 Protein of unknown function DUF142 -0.28
    12 Psyr_2071 outer membrane lipoprotein OprI -0.27
    13 Psyr_0894 PilT protein, N-terminal -0.27
    14 Psyr_1050 conserved hypothetical protein -0.27
    15 Psyr_4362 Rare lipoprotein A -0.27
    16 Psyr_0158 FAD dependent oxidoreductase -0.27
    17 Psyr_0319 conserved hypothetical protein -0.27
    18 Psyr_2014 conserved hypothetical protein -0.26
    19 Psyr_4140 Protein of unknown function DUF140 -0.26
    20 Psyr_0379 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer -0.26

    Or look for positive cofitness