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  • Negative cofitness for Psyr_2915 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, AraC family with amidase-like domain protein
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0835 transcriptional regulator, TraR/DksA family -0.45
    2 Psyr_3097 Peptidase U32 -0.43
    3 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase -0.42
    4 Psyr_3532 PAS -0.41
    5 Psyr_0247 glycine cleavage system H protein -0.41
    6 Psyr_0855 conserved hypothetical protein -0.41
    7 Psyr_1368 Carboxylesterase -0.40
    8 Psyr_2361 DNA damage-inducible DNA polymerase II -0.40
    9 Psyr_1500 GCN5-related N-acetyltransferase -0.40
    10 Psyr_2829 conserved hypothetical protein -0.39
    11 Psyr_0161 Protein of unknown function DUF861 -0.39
    12 Psyr_2259 Beta-lactamase-like protein -0.39
    13 Psyr_1700 Glycosyl hydrolase, BNR repeat protein -0.38
    14 Psyr_4952 hypothetical protein -0.38
    15 Psyr_1792 Amino acid adenylation -0.38
    16 Psyr_1783 CDS -0.38
    17 Psyr_3278 Endonuclease/exonuclease/phosphatase -0.38
    18 Psyr_3025 Major facilitator superfamily -0.37
    19 Psyr_2843 C-5 cytosine-specific DNA methylase -0.37
    20 Psyr_2839 conserved hypothetical protein -0.37

    Or look for positive cofitness