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  • Negative cofitness for Psyr_2523 from Pseudomonas syringae pv. syringae B728a

    DNA polymerase III, alpha subunit
    SEED: Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: error-prone DNA polymerase

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4519 General substrate transporter:Major facilitator superfamily -0.56
    2 Psyr_4656 hypothetical protein -0.53
    3 Psyr_3829 Leucine-rich repeat protein -0.48
    4 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase -0.48
    5 Psyr_1024 Flavodoxin/nitric oxide synthase -0.46
    6 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit -0.44
    7 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein -0.43
    8 Psyr_2531 transcriptional regulator, LysR family -0.43
    9 Psyr_4903 hypothetical protein -0.43
    10 Psyr_3407 conserved hypothetical protein -0.42
    11 Psyr_1765 GCN5-related N-acetyltransferase -0.42
    12 Psyr_0172 Protein of unknown function DUF785 -0.42
    13 Psyr_0992 Protein of unknown function DUF1329 -0.42
    14 Psyr_2567 Zinc-containing alcohol dehydrogenase superfamily -0.42
    15 Psyr_4023 conserved hypothetical protein -0.42
    16 Psyr_2330 FAD dependent oxidoreductase -0.42
    17 Psyr_4326 type III effector HopI1 -0.42
    18 Psyr_4344 conserved hypothetical protein -0.42
    19 Psyr_0475 Protein of unknown function YGGT -0.42
    20 Psyr_2582 TonB-dependent siderophore receptor -0.41

    Or look for positive cofitness