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  • Negative cofitness for Psyr_2482 from Pseudomonas syringae pv. syringae B728a

    Secretion protein HlyD
    SEED: RND transporter, membrane fusion protein
    KEGG: putative multidrug efflux transporter MdtA

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2513 extracellular solute-binding protein, family 1 -0.38
    2 Psyr_2285 Twin-arginine translocation pathway signal -0.35
    3 Psyr_0113 conserved hypothetical protein -0.31
    4 Psyr_1581 conserved hypothetical protein -0.30
    5 Psyr_2049 K+ transporting ATPase, KdpC subunit -0.30
    6 Psyr_4872 conserved hypothetical protein -0.30
    7 Psyr_1298 exonuclease RecJ -0.30
    8 Psyr_2676 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal -0.30
    9 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase -0.29
    10 Psyr_3718 hypothetical protein -0.29
    11 Psyr_2632 virulence protein SrfB -0.29
    12 Psyr_3411 conserved hypothetical protein -0.29
    13 Psyr_3041 Bacillolysin -0.29
    14 Psyr_2535 GGDEF domain protein -0.28
    15 Psyr_3939 transcriptional regulator, GntR family -0.28
    16 Psyr_2508 transcriptional regulator, IclR family -0.28
    17 Psyr_1795 Taurine dioxygenase -0.27
    18 Psyr_2348 hypothetical protein -0.27
    19 Psyr_4562 conserved domain protein -0.27
    20 Psyr_1008 conserved hypothetical protein -0.27

    Or look for positive cofitness