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  • Negative cofitness for Psyr_2210 from Pseudomonas syringae pv. syringae B728a

    D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
    SEED: D-isomer specific 2-hydroxyacid dehydrogenase family protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_5097 Protein of unknown function DUF892 -0.38
    2 Psyr_3160 Type I secretion membrane fusion protein, HlyD -0.33
    3 Psyr_1198 type III secretion protein HrpF -0.33
    4 Psyr_4050 Protein of unknown function DUF479 -0.32
    5 Psyr_2039 Fimbrial protein -0.31
    6 Psyr_5011 Amino acid adenylation:Thioester reductase -0.31
    7 Psyr_5093 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer -0.30
    8 Psyr_3626 transcriptional regulator, MarR family -0.30
    9 Psyr_2351 tRNA synthetase, class-II (G, H, P and S) -0.29
    10 Psyr_3221 DegT/DnrJ/EryC1/StrS aminotransferase -0.29
    11 Psyr_1200 outer-membrane type III secretion protein HrcC -0.29
    12 Psyr_1210 type III secretion protein HrcQa -0.29
    13 Psyr_2049 K+ transporting ATPase, KdpC subunit -0.28
    14 Psyr_0853 conserved hypothetical protein -0.28
    15 Psyr_3254 multisubunit potassium/proton antiporter, PhaD subunit -0.28
    16 Psyr_2030 Calcium-binding EF-hand -0.28
    17 Psyr_2126 4-carboxymuconolactone decarboxylase -0.28
    18 Psyr_3634 transcriptional regulator, TetR family -0.27
    19 Psyr_2042 hypothetical protein -0.27
    20 Psyr_0345 Secretion protein HlyD -0.27

    Or look for positive cofitness