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  • Negative cofitness for Psyr_2204 from Pseudomonas syringae pv. syringae B728a

    amino acid/amide ABC transporter membrane protein 1, HAAT family
    SEED: Urea ABC transporter, permease protein UrtB
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_1758 extracellular solute-binding protein, family 5 -0.46
    2 Psyr_3163 epralysin, Metallo peptidase, MEROPS family M10B -0.45
    3 Psyr_3231 sugar transferase -0.43
    4 Psyr_2758 ABC transporter:TOBE -0.40
    5 Psyr_4521 Bacterioferritin -0.39
    6 Psyr_0197 Mg chelatase-related protein -0.38
    7 Psyr_0509 PAS:GGDEF -0.36
    8 Psyr_2342 CBS:Transporter-associated region:Integral membrane protein TerC -0.35
    9 Psyr_3462 conserved hypothetical protein -0.34
    10 Psyr_3280 methylthioadenosine phosphorylase -0.34
    11 Psyr_2441 transcriptional regulator, AraC family -0.34
    12 Psyr_0338 ABC transporter -0.34
    13 Psyr_2447 CheB methylesterase -0.33
    14 Psyr_4733 betaine aldehyde dehydrogenase -0.33
    15 Psyr_3659 transcriptional regulator, BolA protein family -0.33
    16 Psyr_4606 Outer membrane autotransporter barrel -0.32
    17 Psyr_2224 FAD dependent oxidoreductase -0.32
    18 Psyr_0839 Deoxyribose-phosphate aldolase -0.32
    19 Psyr_3518 hypothetical protein -0.32
    20 Psyr_4442 membrane protein, putative -0.32

    Or look for positive cofitness