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  • Negative cofitness for Psyr_2201 from Pseudomonas syringae pv. syringae B728a

    amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
    SEED: Urea ABC transporter, ATPase protein UrtE
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_1515 hypothetical protein -0.49
    2 Psyr_2615 Amino acid adenylation -0.44
    3 Psyr_2978 PAS -0.42
    4 Psyr_2614 Amino acid adenylation -0.42
    5 Psyr_1662 tRNA pseudouridine synthase -0.41
    6 Psyr_2608 Amino acid adenylation -0.41
    7 Psyr_1714 exonuclease SbcC -0.40
    8 Psyr_0070 hypothetical protein -0.40
    9 Psyr_0784 CheW-like protein -0.40
    10 Psyr_2616 Amino acid adenylation -0.40
    11 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit -0.40
    12 Psyr_0034 tryptophan synthase, beta chain -0.40
    13 Psyr_1422 Protein of unknown function DUF1528:Relaxase -0.39
    14 Psyr_1651 Protein of unknown function DUF175 -0.39
    15 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE -0.39
    16 Psyr_4914 amino acid ABC transporter membrane protein 2, PAAT family -0.39
    17 Psyr_3274 5-dehydro-2-deoxygluconokinase -0.38
    18 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF -0.38
    19 Psyr_3193 Transcription factor jumonji, jmjC -0.38
    20 Psyr_0219 phosphomannomutase -0.38

    Or look for positive cofitness