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  • Negative cofitness for Psyr_1991 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, IclR family
    SEED: D-galactonate regulator, IclR family

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II -0.44
    2 Psyr_0297 amino acid ABC transporter membrane protein 1, PAAT family -0.42
    3 Psyr_0142 ABC transporter -0.41
    4 Psyr_2922 Permease for cytosine/purines, uracil, thiamine, allantoin -0.40
    5 Psyr_2732 conserved hypothetical protein; putative signal peptide -0.39
    6 Psyr_2100 assimilatory nitrate reductase (NADH) beta subunit -0.39
    7 Psyr_1881 conserved hypothetical protein -0.38
    8 Psyr_2725 Thiolase -0.38
    9 Psyr_2081 conserved hypothetical protein -0.37
    10 Psyr_1758 extracellular solute-binding protein, family 5 -0.36
    11 Psyr_2032 two component transcriptional regulator, winged helix family -0.35
    12 Psyr_0760 carbohydrate ABC transporter membrane protein 2, CUT1 family -0.35
    13 Psyr_2647 hypothetical protein -0.34
    14 Psyr_1377 CinA, C-terminal -0.34
    15 Psyr_3607 transcriptional regulator, LysR family -0.34
    16 Psyr_2404 NUDIX hydrolase -0.34
    17 Psyr_3710 conserved hypothetical protein -0.34
    18 Psyr_2906 Pilus retraction protein PilT -0.34
    19 Psyr_3123 type III effector HopAH2 -0.33
    20 Psyr_1998 lipoprotein, putative -0.33

    Or look for positive cofitness