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  • Negative cofitness for Psyr_1943 from Pseudomonas syringae pv. syringae B728a

    Sigma-70 region 2
    SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4244 hypothetical protein -0.33
    2 Psyr_0535 toluene tolerance protein, putative -0.31
    3 Psyr_0198 Citrate transporter -0.31
    4 Psyr_3966 Uncharacterized protein UPF0065 -0.31
    5 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A -0.29
    6 Psyr_0267 Endonuclease/exonuclease/phosphatase -0.29
    7 Psyr_4730 FecR protein -0.29
    8 Psyr_1833 amino acid ABC transporter substrate-binding protein, PAAT family -0.29
    9 Psyr_3523 Peptidase M20D, amidohydrolase -0.29
    10 Psyr_3931 conserved hypothetical protein -0.28
    11 Psyr_0808 stress protein -0.28
    12 Psyr_3045 PqiB family protein -0.27
    13 Psyr_2890 amino acid ABC transporter ATP-binding protein, PAAT family -0.27
    14 Psyr_3826 Peptidyl-prolyl cis-trans isomerase, cyclophilin type -0.27
    15 Psyr_2072 conserved hypothetical protein -0.27
    16 Psyr_3125 Nicotinamidase -0.26
    17 Psyr_2215 CheW-like protein -0.26
    18 Psyr_4993 hypothetical protein -0.26
    19 Psyr_0538 conserved hypothetical protein -0.26
    20 Psyr_0215 Exodeoxyribonuclease III xth -0.26

    Or look for positive cofitness