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  • Negative cofitness for Psyr_1622 from Pseudomonas syringae pv. syringae B728a

    regulatory protein, LuxR:Autoinducer-binding protein
    SEED: N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator
    KEGG: LuxR family transcriptional regulator

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_3678 adenosylcobinamide-phosphate synthase -0.41
    2 Psyr_0059 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal -0.39
    3 Psyr_0626 DedA -0.39
    4 Psyr_3402 Aldehyde dehydrogenase -0.38
    5 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase -0.38
    6 Psyr_0291 DedA -0.38
    7 Psyr_1300 PAS/PAC sensor hybrid histidine kinase -0.38
    8 Psyr_4866 Aminotransferase class-III -0.38
    9 Psyr_4420 precorrin-6A reductase -0.37
    10 Psyr_4567 Protein of unknown function UPF0075 -0.37
    11 Psyr_4623 Aminoglycoside phosphotransferase -0.37
    12 Psyr_1892 Short-chain dehydrogenase/reductase SDR -0.37
    13 Psyr_1621 Autoinducer synthesis protein -0.36
    14 Psyr_0214 conserved hypothetical protein -0.36
    15 Psyr_4843 NUDIX hydrolase -0.35
    16 Psyr_2464 methionine synthase (B12-dependent) -0.35
    17 Psyr_4732 choline dehydrogenase -0.34
    18 Psyr_3398 Alanine racemase, N-terminal -0.34
    19 Psyr_2686 carbamate kinase -0.34
    20 Psyr_4006 transcriptional regulator, TetR family -0.34

    Or look for positive cofitness