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  • Negative cofitness for Psyr_1433 from Pseudomonas syringae pv. syringae B728a

    C-5 cytosine-specific DNA methylase
    SEED: Type II restriction-modification system methylation subunit
    KEGG: DNA (cytosine-5-)-methyltransferase

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_1807 Allantoicase -0.39
    2 Psyr_1054 alginate biosynthesis protein AlgJ -0.35
    3 Psyr_0718 type IV pilus assembly protein PilX -0.33
    4 Psyr_0508 lyase, putative -0.32
    5 Psyr_1395 virulence -0.32
    6 Psyr_4659 type III effector HopAB1 -0.31
    7 Psyr_0736 umuC protein -0.30
    8 Psyr_0840 Pentapeptide repeat protein -0.30
    9 Psyr_1055 Membrane bound O-acyl transferase, MBOAT -0.30
    10 Psyr_2152 monosaccharide ABC transporter ATP-binding protein, CUT2 family -0.30
    11 Psyr_0920 Glycosyl transferase, group 1 -0.29
    12 Psyr_1053 alginate biosynthesis protein AlgF -0.29
    13 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) -0.28
    14 Psyr_1095 Glycine cleavage system T protein -0.28
    15 Psyr_4363 membrane-bound lytic murein transglycosylase B -0.27
    16 Psyr_1817 condensin subunit Smc -0.27
    17 Psyr_0219 phosphomannomutase -0.27
    18 Psyr_4647 hypothetical protein -0.27
    19 Psyr_1770 Enoyl-CoA hydratase/isomerase -0.27
    20 Psyr_2431 Zinc-containing alcohol dehydrogenase superfamily -0.27

    Or look for positive cofitness