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  • Negative cofitness for Psyr_1418 from Pseudomonas syringae pv. syringae B728a

    Radical SAM
    SEED: Queuosine Biosynthesis QueE Radical SAM
    KEGG: queuosine biosynthesis protein QueE

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2586 Drug resistance transporter EmrB/QacA subfamily -0.40
    2 Psyr_2235 gluconolactonase -0.39
    3 Psyr_1965 Twin-arginine translocation pathway signal -0.37
    4 Psyr_2640 NUDIX hydrolase -0.33
    5 Psyr_1933 hypothetical protein -0.33
    6 Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) -0.33
    7 Psyr_2193 Secretion protein HlyD -0.32
    8 Psyr_0360 serine O-acetyltransferase -0.32
    9 Psyr_0544 hydroxymethylpyrimidine synthase -0.32
    10 Psyr_1759 extracellular solute-binding protein, family 5 -0.32
    11 Psyr_0232 gamma-glutamylputrescine oxidase -0.31
    12 Psyr_4236 extracellular solute-binding protein, family 5 -0.31
    13 Psyr_1621 Autoinducer synthesis protein -0.31
    14 Psyr_4506 Glycerophosphodiester phosphodiesterase -0.31
    15 Psyr_0432 conserved hypothetical protein -0.31
    16 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase -0.30
    17 Psyr_4795 Lysine exporter protein (LYSE/YGGA) -0.30
    18 Psyr_2723 transcriptional regulator, LysR family -0.30
    19 Psyr_4453 Urease accessory protein UreG -0.30
    20 Psyr_2722 LamB/YcsF -0.30

    Or look for positive cofitness