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  • Negative cofitness for Psyr_1215 from Pseudomonas syringae pv. syringae B728a

    Type III secretion protein HrcV
    SEED: Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
    KEGG: type III secretion protein SctV

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0492 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt -0.55
    2 Psyr_1010 Glutathione peroxidase -0.47
    3 Psyr_3720 Filamentation induced by cAMP protein Fic -0.45
    4 Psyr_1572 HNH endonuclease -0.42
    5 Psyr_1163 Isochorismatase hydrolase -0.42
    6 Psyr_4805 YD repeat protein -0.42
    7 Psyr_0503 conserved domain protein -0.42
    8 Psyr_1332 Glycosyl transferase, family 2 -0.41
    9 Psyr_0487 glutathione synthase -0.40
    10 Psyr_0749 AMP-dependent synthetase and ligase -0.39
    11 Psyr_1180 hypothetical protein -0.39
    12 Psyr_2377 Flavoprotein monooxygenase:Monooxygenase, FAD-binding protein -0.39
    13 Psyr_0938 hypothetical protein -0.38
    14 Psyr_0490 CheW-like protein -0.38
    15 Psyr_2698 Ricin B lectin -0.38
    16 Psyr_0131 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 -0.37
    17 Psyr_0006 putative phenylacetaldoxime dehydratase -0.37
    18 Psyr_2643 hypothetical protein -0.37
    19 Psyr_3605 Trimethylamine-N-oxide reductase (cytochrome c) -0.37
    20 Psyr_1204 hypothetical protein -0.37

    Or look for positive cofitness