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  • Negative cofitness for Psyr_0947 from Pseudomonas syringae pv. syringae B728a

    TPR repeat protein:TPR repeat protein
    SEED: FIG140336: TPR domain protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4006 transcriptional regulator, TetR family -0.49
    2 Psyr_2146 methionine aminopeptidase, type I -0.45
    3 Psyr_3737 transcriptional regulator, MarR family -0.44
    4 Psyr_2818 hypothetical protein -0.42
    5 Psyr_4602 hypothetical protein -0.40
    6 Psyr_0727 Protein of unknown function DUF152 -0.40
    7 Psyr_3324 transcriptional regulator, TetR family -0.39
    8 Psyr_0854 conserved hypothetical protein -0.39
    9 Psyr_4264 ABC transporter -0.38
    10 Psyr_3971 lipoprotein, putative -0.38
    11 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) -0.37
    12 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N -0.37
    13 Psyr_1076 Cyanate transport system protein -0.36
    14 Psyr_2822 hypothetical protein -0.36
    15 Psyr_5035 Peptidase M23B -0.35
    16 Psyr_2772 Fibronectin, type III -0.34
    17 Psyr_2789 conserved hypothetical protein -0.34
    18 Psyr_2843 C-5 cytosine-specific DNA methylase -0.33
    19 Psyr_2160 cold-shock DNA-binding protein family -0.33
    20 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase -0.33

    Or look for positive cofitness