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  • Negative cofitness for Psyr_0718 from Pseudomonas syringae pv. syringae B728a

    type IV pilus assembly protein PilX
    SEED: Type IV fimbrial biogenesis protein PilX
    KEGG: type IV pilus assembly protein PilX

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0156 Binding-protein-dependent transport systems inner membrane component -0.38
    2 Psyr_2483 Acriflavin resistance protein -0.36
    3 Psyr_4575 adenosylmethionine decarboxylase proenzyme -0.35
    4 Psyr_0232 gamma-glutamylputrescine oxidase -0.35
    5 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp -0.35
    6 Psyr_1683 conserved hypothetical protein -0.34
    7 Psyr_3566 transcriptional regulator, AraC family -0.33
    8 Psyr_1265 hypothetical protein -0.33
    9 Psyr_1433 C-5 cytosine-specific DNA methylase -0.33
    10 Psyr_0006 putative phenylacetaldoxime dehydratase -0.33
    11 Psyr_2755 2-nitropropane dioxygenase, NPD -0.32
    12 Psyr_3542 Short-chain dehydrogenase/reductase SDR -0.32
    13 Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 -0.32
    14 Psyr_1090 DNA polymerase III, chi subunit -0.31
    15 Psyr_1424 Peptidase S24, S26A and S26B -0.31
    16 Psyr_0544 hydroxymethylpyrimidine synthase -0.31
    17 Psyr_1186 type III effector HopM1 -0.30
    18 Psyr_2715 Major facilitator superfamily -0.30
    19 Psyr_1845 GTP cyclohydrolase I -0.30
    20 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit -0.30

    Or look for positive cofitness