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  • Negative cofitness for Psyr_0140 from Pseudomonas syringae pv. syringae B728a

    Binding-protein-dependent transport systems inner membrane component
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_3291 hypothetical protein -0.45
    2 Psyr_1389 Protein of unknown function DUF1456 -0.44
    3 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K -0.36
    4 Psyr_1432 hypothetical protein -0.36
    5 Psyr_1573 cyclic nucleotide-binding protein -0.36
    6 Psyr_2587 IucA/IucC -0.36
    7 Psyr_RNA61 tRNA-Gly -0.35
    8 Psyr_1808 conserved hypothetical protein -0.35
    9 Psyr_2043 lipoprotein, putative -0.35
    10 Psyr_3865 conserved hypothetical protein -0.35
    11 Psyr_1903 conserved hypothetical protein -0.35
    12 Psyr_0175 conserved hypothetical protein -0.34
    13 Psyr_3766 hypothetical protein -0.34
    14 Psyr_1455 conserved hypothetical protein -0.34
    15 Psyr_2471 hydroxymethylglutaryl-CoA lyase -0.34
    16 Psyr_0145 conserved hypothetical protein -0.33
    17 Psyr_3290 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase -0.33
    18 Psyr_3664 DTW -0.33
    19 Psyr_1442 conserved hypothetical protein -0.33
    20 Psyr_1567 Uncharacterized conserved protein UCP006173 -0.33

    Or look for positive cofitness