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  • Negative cofitness for Psyr_0017 from Pseudomonas syringae pv. syringae B728a

    16S rRNA m(5)C-967 methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase B

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2614 Amino acid adenylation -0.46
    2 Psyr_4739 tRNA (guanine-N(7)-)-methyltransferase -0.42
    3 Psyr_2278 luciferase -0.41
    4 Psyr_2978 PAS -0.41
    5 Psyr_2188 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 -0.41
    6 Psyr_1021 Short-chain dehydrogenase/reductase SDR -0.41
    7 Psyr_3837 conserved hypothetical protein -0.40
    8 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF -0.40
    9 Psyr_3274 5-dehydro-2-deoxygluconokinase -0.39
    10 Psyr_4836 N-formylglutamate deformylase -0.39
    11 Psyr_4914 amino acid ABC transporter membrane protein 2, PAAT family -0.39
    12 Psyr_3418 PilT protein, N-terminal -0.39
    13 Psyr_1312 transcriptional regulator, TetR family -0.38
    14 Psyr_4259 ATP-dependent protease, putative -0.38
    15 Psyr_1858 transcriptional regulator, LuxR family -0.38
    16 Psyr_1395 virulence -0.37
    17 Psyr_2179 General substrate transporter:Major facilitator superfamily -0.37
    18 Psyr_0367 formimidoylglutamate deiminase -0.36
    19 Psyr_1651 Protein of unknown function DUF175 -0.36
    20 Psyr_2616 Amino acid adenylation -0.36

    Or look for positive cofitness