Negative cofitness for Pf6N2E2_960 from Pseudomonas fluorescens FW300-N2E2

Type IV secretory pathway, VirD4 components
SEED: Type IV secretory pathway, VirD4 components

Computing cofitness values with 388 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	Pf6N2E2_1984		probable exported protein STY4558	-0.31
2	Pf6N2E2_4382		FIG00953403: hypothetical protein	-0.30
3	Pf6N2E2_2943		Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase	-0.27
4	Pf6N2E2_1625		Ferric reductase (1.6.99.14)	-0.26
5	Pf6N2E2_551		Protein ImpG/VasA	-0.26
6	Pf6N2E2_69		Probable type IV pilus assembly FimV-related transmembrane protein	-0.26
7	Pf6N2E2_4120		Trk system potassium uptake protein TrkA	-0.26
8	Pf6N2E2_2938		Outer membrane lipoprotein	-0.26
9	Pf6N2E2_1198		hypothetical protein	-0.25
10	Pf6N2E2_5436		MutT/nudix family protein	-0.25
11	Pf6N2E2_1253		transcriptional regulator	-0.25
12	Pf6N2E2_2007		Error-prone, lesion bypass DNA polymerase V (UmuC)	-0.25
13	Pf6N2E2_5896		Cystathionine gamma-lyase (EC 4.4.1.1)	-0.25
14	Pf6N2E2_1806		hypothetical protein	-0.25
15	Pf6N2E2_2030		ABC transporter, periplasmic substrate-binding protein	-0.25
16	Pf6N2E2_4612		Glutathione synthetase (EC 6.3.2.3)	-0.24
17	Pf6N2E2_1865		Beta-carotene hydroxylase	-0.24
18	Pf6N2E2_5960		Putative deoxyribonuclease YcfH	-0.24
19	Pf6N2E2_2987		FIG074102: hypothetical protein	-0.24
20	Pf6N2E2_4828		Vfr transcriptional regulator / Cyclic AMP receptor protein	-0.24

Or look for positive cofitness