Negative cofitness for Pf6N2E2_608 from Pseudomonas fluorescens FW300-N2E2

Transcriptional regulator of the arabinose operon in Shewanella, GntR family
SEED: Transcriptional regulator of the arabinose operon in Shewanella, GntR family

Computing cofitness values with 388 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 Pf6N2E2_5977 Galactonate dehydratase (EC 4.2.1.6) -0.47
2 Pf6N2E2_5978 Hexuronate transporter -0.44
3 Pf6N2E2_5969 ABC transporter for D-galactose/L-arabinose, ATPase component (from data) -0.38
4 Pf6N2E2_5970 ABC transporter for D-galactose/L-arabinose, permease component (from data) -0.37
5 Pf6N2E2_755 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide -0.34
6 Pf6N2E2_5966 L-arabinolactonase (EC 3.1.1.15) (from data) -0.33
7 Pf6N2E2_5976 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) -0.32
8 Pf6N2E2_5968 ABC transporter for D-galactose/L-arabinose, substrate-binding component (from data) -0.32
9 Pf6N2E2_6082 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) -0.30
10 Pf6N2E2_5609 DNA-binding response regulator ColR -0.29
11 Pf6N2E2_5819 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p -0.29
12 Pf6N2E2_2979 Histone acetyltransferase HPA2 and related acetyltransferases -0.28
13 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) -0.28
14 Pf6N2E2_4580 FIG015287: Zinc protease -0.27
15 Pf6N2E2_4480 Xaa-Pro aminopeptidase (EC 3.4.11.9) -0.27
16 Pf6N2E2_3692 Selenoprotein O and cysteine-containing homologs -0.26
17 Pf6N2E2_4981 Nitrogen regulation protein NR(I) -0.25
18 Pf6N2E2_614 3-carboxymuconate cyclase -0.25
19 Pf6N2E2_5975 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) -0.24
20 Pf6N2E2_1211 Lactoylglutathione lyase -0.24

Or look for positive cofitness