Negative cofitness for Pf6N2E2_4539 from Pseudomonas fluorescens FW300-N2E2

Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
SEED: Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
KEGG: type III secretion protein SctU

Computing cofitness values with 388 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	Pf6N2E2_4940		FIG00954181: hypothetical protein	-0.25
2	Pf6N2E2_5671		Succinylglutamate desuccinylase (EC 3.5.1.96)	-0.24
3	Pf6N2E2_5229		Transcriptional regulator, MerR family, associated with photolyase	-0.23
4	Pf6N2E2_1747		3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	-0.22
5	Pf6N2E2_5993		FIG00957412: hypothetical protein	-0.22
6	Pf6N2E2_5230		COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA	-0.21
7	Pf6N2E2_1552		Transcriptional regulator, LysR family	-0.21
8	Pf6N2E2_4695		putative secreted protein	-0.21
9	Pf6N2E2_742		4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)	-0.21
10	Pf6N2E2_4386		Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	-0.20
11	Pf6N2E2_1492		No significant database matches	-0.20
12	Pf6N2E2_1453		Xylose activator XylR (AraC family)	-0.20
13	Pf6N2E2_941		Probable transmembrane protein	-0.20
14	Pf6N2E2_955		FIG00953508: hypothetical protein	-0.19
15	Pf6N2E2_776		Transcriptional regulator, LysR family	-0.19
16	Pf6N2E2_2171		Rhodanese-related sulfurtransferase	-0.19
17	Pf6N2E2_4810		Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)	-0.19
18	Pf6N2E2_4634		Protein yceI precursor	-0.18
19	Pf6N2E2_439		FIG00958580: hypothetical protein	-0.18
20	Pf6N2E2_5168		Regulator of competence-specific genes	-0.18

Or look for positive cofitness